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Bioinformatics Data Science Workshop April 5-6, 2023

Bioinformatics Data Science Workshops
Bioinformatics Core
Department of Quantitative Health Sciences
JABSOM, University of Hawaii at Manoa

*All workshops include theory and hands-on practice

Bioinformatics Data Science Workshops will offer a two-day virtual workshop from Wednesday, April 5, to Thursday, April 6, @ 9 am-12 pm HST. If you are interested in participating, please fill out this form. Please remember that registration is limited and depends on a first-come, first-serve basis.

The registration deadline is Monday, 4/3, 23:59 HST.  A Zoom link will be sent on Tuesday, 4/4

Please Register Here

Workshop Day 1: Introduction to Cloud Computing

Date/Time: 9:00 am – 12:00 pm, HST, April 5, 2023      

  • Concepts of cloud computing, cloud computing platforms and services
  • Using cloud computing in biomedical research
  • Google Cloud Platforms (GCP)
  • Hands-on labs: GCP account, cloud storage bucket, virtual machines, Jupyter notebooks

Workshop Day 2: DNA Methylation and Whole-Genome Bisulfite Sequencing Data Analysis
Date/Time: 9:00 am – 12:00 pm, HST, April 6, 2023

  • Introduction to DNA methylation, DNA methylation assays, Whole-genome bisulfite sequencing(WGBS)
  • WGBS data analysis workflow: methylation level extraction, differential methylated regions (DMRs) detection
  • Hands-on practice: Bismark workflow, metilene

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